Julia Markdown not "Weaving"

How-to
1

Hello!

I am new to using Pumas and am working on basic structural model identification. I am currently using a Julia Markdown file and want to view it as an HTML/PDF. Although, when I try to use Weave.jl, I get the following error:

julia> Pkg.add("Weave")
    Updating registry at `C:\Users\preru\.julia\registries\General`
ERROR: GitError(Code:ENOTFOUND, Class:Config, config value 'safe.directory' was not found)
Stacktrace:
  [1] macro expansion
    @ C:\Pumas-v2.5.1\Julia-1.9.3\share\julia\stdlib\v1.9\LibGit2\src\error.jl:111 [inlined]
  [2] LibGit2.GitRepo(path::String)
    @ LibGit2 C:\Pumas-v2.5.1\Julia-1.9.3\share\julia\stdlib\v1.9\LibGit2\src\repository.jl:11
  [3] (::Pkg.Registry.var"#73#78"{Base.TTY, Dates.Day, Dict{String, Any}, String, Vector{Pkg.Registry.RegistryInstance}})()
    @ Pkg.Registry C:\Pumas-v2.5.1\Julia-1.9.3\share\julia\stdlib\v1.9\Pkg\src\Registry\Registry.jl:449
  [4] mkpidlock(f::Pkg.Registry.var"#73#78"{Base.TTY, Dates.Day, Dict{String, Any}, String, Vector{Pkg.Registry.RegistryInstance}}, at::String, pid::Int32; kwopts::Base.Pairs{Symbol, Int64, Tuple{Symbol}, NamedTuple{(:stale_age,), Tuple{Int64}}})
    @ FileWatching.Pidfile C:\Pumas-v2.5.1\Julia-1.9.3\share\julia\stdlib\v1.9\FileWatching\src\pidfile.jl:82
  [5] #mkpidlock#6
    @ C:\Pumas-v2.5.1\Julia-1.9.3\share\julia\stdlib\v1.9\FileWatching\src\pidfile.jl:77 [inlined]
  [6] mkpidlock
    @ C:\Pumas-v2.5.1\Julia-1.9.3\share\julia\stdlib\v1.9\FileWatching\src\pidfile.jl:77 [inlined]
  [7] update(regs::Vector{Pkg.Registry.RegistrySpec}; io::Base.TTY, force::Bool, depots::Vector{String}, update_cooldown::Dates.Day)
    @ Pkg.Registry C:\Pumas-v2.5.1\Julia-1.9.3\share\julia\stdlib\v1.9\Pkg\src\Registry\Registry.jl:379
  [8] update
    @ C:\Pumas-v2.5.1\Julia-1.9.3\share\julia\stdlib\v1.9\Pkg\src\Registry\Registry.jl:372 [inlined]
  [9] update_registries(ctx::Pkg.Types.Context; force::Bool, kwargs::Base.Pairs{Symbol, Dates.Day, Tuple{Symbol}, NamedTuple{(:update_cooldown,), Tuple{Dates.Day}}})
    @ Pkg.Operations C:\Pumas-v2.5.1\Julia-1.9.3\share\julia\stdlib\v1.9\Pkg\src\Operations.jl:1266
 [10] update_registries
    @ C:\Pumas-v2.5.1\Julia-1.9.3\share\julia\stdlib\v1.9\Pkg\src\Operations.jl:1263 [inlined]
 [11] add(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; preserve::Pkg.Types.PreserveLevel, platform::Base.BinaryPlatforms.Platform,
 kwargs::Base.Pairs{Symbol, Base.TTY, Tuple{Symbol}, NamedTuple{(:io,), Tuple{Base.TTY}}})
    @ Pkg.API C:\Pumas-v2.5.1\Julia-1.9.3\share\julia\stdlib\v1.9\Pkg\src\API.jl:259
 [12] add(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.TTY, kwargs::Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
    @ Pkg.API C:\Pumas-v2.5.1\Julia-1.9.3\share\julia\stdlib\v1.9\Pkg\src\API.jl:156
 [13] add(pkgs::Vector{Pkg.Types.PackageSpec})
    @ Pkg.API C:\Pumas-v2.5.1\Julia-1.9.3\share\julia\stdlib\v1.9\Pkg\src\API.jl:145
 [14] #add#25
    @ C:\Pumas-v2.5.1\Julia-1.9.3\share\julia\stdlib\v1.9\Pkg\src\API.jl:144 [inlined]
 [15] add
    @ C:\Pumas-v2.5.1\Julia-1.9.3\share\julia\stdlib\v1.9\Pkg\src\API.jl:144 [inlined]
 [16] #add#24
    @ C:\Pumas-v2.5.1\Julia-1.9.3\share\julia\stdlib\v1.9\Pkg\src\API.jl:143 [inlined]
 [17] add(pkg::String)
    @ Pkg.API C:\Pumas-v2.5.1\Julia-1.9.3\share\julia\stdlib\v1.9\Pkg\src\API.jl:143
 [18] top-level scope
    @ REPL[1]:1

Please provide guidance on how to resolve this.

Thanks,
Prerna

2

Hello Prerna,

Would you be able to run the following commands

using Pkg
Pkg.Registry.rm("General")
Pkg.Registry.add("General")
Pkg.add("Weave")

and let us know if you see any errors? Please be aware, though, that in the next release of Pumas, Quarto will be supported and provide similar (better?) functionality than Weave.