andreasnoack:
stacktrace
Hi Andreas,
I’m using Pumas IDE app on juliahub, I think this should be version 2.1 or if you can please guide me on how to get the exact version!
here is the complete stacktrace
julia> inspect_model_1cmp_ZO = inspect(fit_model_1cmp_ZO)
[ Info: Calculating predictions.
[ Info: Calculating weighted residuals.
[ Info: Calculating empirical bayes.
[ Info: Evaluating individual parameters.
[ Info: Evaluating dose control parameters.
ERROR: MethodError: Cannot `convert` an object of type Int64 to an object of type Symbol
Closest candidates are:
convert(::Type{T}, ::T) where T at /opt/julia-1.7.1/share/julia/base/essentials.jl:218
Symbol(::Any...) at /opt/julia-1.7.1/share/julia/base/strings/basic.jl:229
Stacktrace:
[1] cvt1
@ ./essentials.jl:343 [inlined]
[2] ntuple
@ ./ntuple.jl:49 [inlined]
[3] convert(#unused#::Type{Tuple{Symbol, Symbol}}, x::Tuple{Symbol, Int64})
@ Base ./essentials.jl:344
[4] push!(a::Vector{Tuple{Symbol, Symbol}}, item::Tuple{Symbol, Int64})
@ Base ./array.jl:994
[5] _dcp_keys(dcp_el::NamedTuple{(:duration, :lags), Tuple{Float64, NamedTuple{(:Depot, :Central), Tuple{Float64, Float64}}}})
@ Pumas /builds/PumasAI/PumasSystemImages-jl/.julia/packages/Pumas/Ozwn0/src/estimation/diagnostics.jl:1464
[6] _dosecontrol(model::PumasModel{(tvCL = 1, tvVc = 1, tvka = 1, tvdur = 1, tvlag = 1, Ω = 1, σ_prop = 1, σ_add = 1), 1, ParamSet{NamedTuple{(:tvCL, :tvVc, :tvka, :tvdur, :tvlag, :Ω, :σ_prop, :σ_add), Tuple{RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, PDiagDomain{PDMats.PDiagMat{Float64, Vector{Float64}}}, RealDomain{Float64, TransformVariables.Infinity{true}, Float64}, RealDomain{Float64, TransformVariables.Infinity{true}, Float64}}}}, var"#43#61", var"#44#62", var"#46#64", var"#48#66", Pumas.LinearODE, var"#49#67", var"#55#73", ModelingToolkit.ODESystem}, subject::Subject{NamedTuple{(:DV,), Tuple{Vector{Union{Missing, Float64}}}}, Pumas.ConstantCovar{NamedTuple{(:IsDM, :IsPM), Tuple{String3, String3}}}, Vector{Pumas.Event{Float64, Float64, Float64, Float64, Float64, Float64, Int64}}, Vector{Float64}}, param::NamedTuple{(:tvCL, :tvVc, :tvka, :tvdur, :tvlag, :Ω, :σ_prop, :σ_add), Tuple{Float64, Float64, Float64, Float64, Float64, PDMats.PDiagMat{Float64, Vector{Float64}}, Float64, Float64}}, vrandeffsorth::Vector{Float64})
@ Pumas /builds/PumasAI/PumasSystemImages-jl/.julia/packages/Pumas/Ozwn0/src/estimation/diagnostics.jl:1443
[7] (::Pumas.var"#940#941"{Pumas.FittedPumasModel{PumasModel{(tvCL = 1, tvVc = 1, tvka = 1, tvdur = 1, tvlag = 1, Ω = 1, σ_prop = 1, σ_add = 1), 1, ParamSet{NamedTuple{(:tvCL, :tvVc, :tvka, :tvdur, :tvlag, :Ω, :σ_prop, :σ_add), Tuple{RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, PDiagDomain{PDMats.PDiagMat{Float64, Vector{Float64}}}, RealDomain{Float64, TransformVariables.Infinity{true}, Float64}, RealDomain{Float64, TransformVariables.Infinity{true}, Float64}}}}, var"#43#61", var"#44#62", var"#46#64", var"#48#66", Pumas.LinearODE, var"#49#67", var"#55#73", ModelingToolkit.ODESystem}, Vector{Subject{NamedTuple{(:DV,), Tuple{Vector{Union{Missing, Float64}}}}, Pumas.ConstantCovar{NamedTuple{(:IsDM, :IsPM), Tuple{String3, String3}}}, Vector{Pumas.Event{Float64, Float64, Float64, Float64, Float64, Float64, Int64}}, Vector{Float64}}}, Optim.MultivariateOptimizationResults{Optim.BFGS{LineSearches.InitialStatic{Float64}, LineSearches.BackTracking{Float64, Int64}, Nothing, Float64, Optim.Flat}, Vector{Float64}, Float64, Float64, Vector{Optim.OptimizationState{Float64, Optim.BFGS{LineSearches.InitialStatic{Float64}, LineSearches.BackTracking{Float64, Int64}, Nothing, Float64, Optim.Flat}}}, Bool, NamedTuple{(:f_limit_reached, :g_limit_reached, :h_limit_reached, :time_limit, :callback, :f_increased), NTuple{6, Bool}}}, Pumas.FOCE, Vector{Vector{Float64}}, NamedTuple{(:optimize_fn, :constantcoef, :omegas, :ensemblealg, :diffeq_options), Tuple{Pumas.DefaultOptimizeFN{Nothing, NamedTuple{(:show_trace, :store_trace, :extended_trace, :g_tol, :allow_f_increases), Tuple{Bool, Bool, Bool, Float64, Bool}}}, NamedTuple{(), Tuple{}}, Tuple{}, EnsembleThreads, NamedTuple{(), Tuple{}}}}, ParamSet{NamedTuple{(:tvCL, :tvVc, :tvka, :tvdur, :tvlag, :Ω, :σ_prop, :σ_add), Tuple{RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, PDiagDomain{PDMats.PDiagMat{Float64, Vector{Float64}}}, RealDomain{Float64, TransformVariables.Infinity{true}, Float64}, RealDomain{Float64, TransformVariables.Infinity{true}, Float64}}}}}, NamedTuple{(:tvCL, :tvVc, :tvka, :tvdur, :tvlag, :Ω, :σ_prop, :σ_add), Tuple{Float64, Float64, Float64, Float64, Float64, PDMats.PDiagMat{Float64, Vector{Float64}}, Float64, Float64}}})(::Tuple{Subject{NamedTuple{(:DV,), Tuple{Vector{Union{Missing, Float64}}}}, Pumas.ConstantCovar{NamedTuple{(:IsDM, :IsPM), Tuple{String3, String3}}}, Vector{Pumas.Event{Float64, Float64, Float64, Float64, Float64, Float64, Int64}}, Vector{Float64}}, Vector{Float64}})
@ Pumas /builds/PumasAI/PumasSystemImages-jl/.julia/packages/Pumas/Ozwn0/src/estimation/diagnostics.jl:1397
[8] iterate
@ ./generator.jl:47 [inlined]
[9] collect
@ ./array.jl:724 [inlined]
[10] map
@ ./abstractarray.jl:2878 [inlined]
[11] dosecontrol
@ /builds/PumasAI/PumasSystemImages-jl/.julia/packages/Pumas/Ozwn0/src/estimation/diagnostics.jl:1396 [inlined]
[12] inspect(fpm::Pumas.FittedPumasModel{PumasModel{(tvCL = 1, tvVc = 1, tvka = 1, tvdur = 1, tvlag = 1, Ω = 1, σ_prop = 1, σ_add = 1), 1, ParamSet{NamedTuple{(:tvCL, :tvVc, :tvka, :tvdur, :tvlag, :Ω, :σ_prop, :σ_add), Tuple{RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, PDiagDomain{PDMats.PDiagMat{Float64, Vector{Float64}}}, RealDomain{Float64, TransformVariables.Infinity{true}, Float64}, RealDomain{Float64, TransformVariables.Infinity{true}, Float64}}}}, var"#43#61", var"#44#62", var"#46#64", var"#48#66", Pumas.LinearODE, var"#49#67", var"#55#73", ModelingToolkit.ODESystem}, Vector{Subject{NamedTuple{(:DV,), Tuple{Vector{Union{Missing, Float64}}}}, Pumas.ConstantCovar{NamedTuple{(:IsDM, :IsPM), Tuple{String3, String3}}}, Vector{Pumas.Event{Float64, Float64, Float64, Float64, Float64, Float64, Int64}}, Vector{Float64}}}, Optim.MultivariateOptimizationResults{Optim.BFGS{LineSearches.InitialStatic{Float64}, LineSearches.BackTracking{Float64, Int64}, Nothing, Float64, Optim.Flat}, Vector{Float64}, Float64, Float64, Vector{Optim.OptimizationState{Float64, Optim.BFGS{LineSearches.InitialStatic{Float64}, LineSearches.BackTracking{Float64, Int64}, Nothing, Float64, Optim.Flat}}}, Bool, NamedTuple{(:f_limit_reached, :g_limit_reached, :h_limit_reached, :time_limit, :callback, :f_increased), NTuple{6, Bool}}}, Pumas.FOCE, Vector{Vector{Float64}}, NamedTuple{(:optimize_fn, :constantcoef, :omegas, :ensemblealg, :diffeq_options), Tuple{Pumas.DefaultOptimizeFN{Nothing, NamedTuple{(:show_trace, :store_trace, :extended_trace, :g_tol, :allow_f_increases), Tuple{Bool, Bool, Bool, Float64, Bool}}}, NamedTuple{(), Tuple{}}, Tuple{}, EnsembleThreads, NamedTuple{(), Tuple{}}}}, ParamSet{NamedTuple{(:tvCL, :tvVc, :tvka, :tvdur, :tvlag, :Ω, :σ_prop, :σ_add), Tuple{RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, PDiagDomain{PDMats.PDiagMat{Float64, Vector{Float64}}}, RealDomain{Float64, TransformVariables.Infinity{true}, Float64}, RealDomain{Float64, TransformVariables.Infinity{true}, Float64}}}}}; wres_approx::Pumas.FOCE, nsim::Int64, rng::TaskLocalRNG)
@ Pumas /builds/PumasAI/PumasSystemImages-jl/.julia/packages/Pumas/Ozwn0/src/estimation/diagnostics.jl:1126
[13] inspect(fpm::Pumas.FittedPumasModel{PumasModel{(tvCL = 1, tvVc = 1, tvka = 1, tvdur = 1, tvlag = 1, Ω = 1, σ_prop = 1, σ_add = 1), 1, ParamSet{NamedTuple{(:tvCL, :tvVc, :tvka, :tvdur, :tvlag, :Ω, :σ_prop, :σ_add), Tuple{RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, PDiagDomain{PDMats.PDiagMat{Float64, Vector{Float64}}}, RealDomain{Float64, TransformVariables.Infinity{true}, Float64}, RealDomain{Float64, TransformVariables.Infinity{true}, Float64}}}}, var"#43#61", var"#44#62", var"#46#64", var"#48#66", Pumas.LinearODE, var"#49#67", var"#55#73", ModelingToolkit.ODESystem}, Vector{Subject{NamedTuple{(:DV,), Tuple{Vector{Union{Missing, Float64}}}}, Pumas.ConstantCovar{NamedTuple{(:IsDM, :IsPM), Tuple{String3, String3}}}, Vector{Pumas.Event{Float64, Float64, Float64, Float64, Float64, Float64, Int64}}, Vector{Float64}}}, Optim.MultivariateOptimizationResults{Optim.BFGS{LineSearches.InitialStatic{Float64}, LineSearches.BackTracking{Float64, Int64}, Nothing, Float64, Optim.Flat}, Vector{Float64}, Float64, Float64, Vector{Optim.OptimizationState{Float64, Optim.BFGS{LineSearches.InitialStatic{Float64}, LineSearches.BackTracking{Float64, Int64}, Nothing, Float64, Optim.Flat}}}, Bool, NamedTuple{(:f_limit_reached, :g_limit_reached, :h_limit_reached, :time_limit, :callback, :f_increased), NTuple{6, Bool}}}, Pumas.FOCE, Vector{Vector{Float64}}, NamedTuple{(:optimize_fn, :constantcoef, :omegas, :ensemblealg, :diffeq_options), Tuple{Pumas.DefaultOptimizeFN{Nothing, NamedTuple{(:show_trace, :store_trace, :extended_trace, :g_tol, :allow_f_increases), Tuple{Bool, Bool, Bool, Float64, Bool}}}, NamedTuple{(), Tuple{}}, Tuple{}, EnsembleThreads, NamedTuple{(), Tuple{}}}}, ParamSet{NamedTuple{(:tvCL, :tvVc, :tvka, :tvdur, :tvlag, :Ω, :σ_prop, :σ_add), Tuple{RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, RealDomain{Int64, Int64, Float64}, PDiagDomain{PDMats.PDiagMat{Float64, Vector{Float64}}}, RealDomain{Float64, TransformVariables.Infinity{true}, Float64}, RealDomain{Float64, TransformVariables.Infinity{true}, Float64}}}}})
@ Pumas /builds/PumasAI/PumasSystemImages-jl/.julia/packages/Pumas/Ozwn0/src/estimation/diagnostics.jl:1099
[14] top-level scope
@ ~/data/code/Omeprazole Clinical Trial/sc/omeprazole.jl:422