Error Dowloading RCall

1

Hi,

I am trying to download the RCall package in Julia. But for some reason I am not able to download it. This is the error msg that I get. Please can you help me fix this.

julia> Pkg.build("RCall")
    Building Conda → `~/data/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/6e47d11ea2776bc5627421d59cdcc1296c058071/build.log`
    Building RCall → `~/data/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/2c0ffd39860c9a48259a0f57214ced2024ab63bc/build.log`
ERROR: Error building `RCall`: 
┌ Error: Could not load storage drivers from data project
│   project =
│    DataSets.TomlFileDataProject [/opt/juliahub/JuliaHubDataDriver.toml]:
│      (empty)
│   exception =
│    ArgumentError: Package JuliaHubData [e241c0f9-2941-4184-86f1-92558f4420e8] is required but does not seem to be installed:
│     - Run `Pkg.instantiate()` to install all recorded dependencies.
│    
│    Stacktrace:
│     [1] _require(pkg::Base.PkgId)
│       @ Base ./loading.jl:1089
│     [2] require(uuidkey::Base.PkgId)
│       @ Base ./loading.jl:1013
│     [3] add_storage_driver(project::DataSets.TomlFileDataProject)
│       @ DataSets /build/_work/PumasSystemImages/PumasSystemImages/julia_depot/packages/DataSets/DvJb4/src/DataSets.jl:726
│     [4] __init__()
│       @ DataSets /build/_work/PumasSystemImages/PumasSystemImages/julia_depot/packages/DataSets/DvJb4/src/DataSets.jl:661
└ @ DataSets /build/_work/PumasSystemImages/PumasSystemImages/julia_depot/packages/DataSets/DvJb4/src/DataSets.jl:663
ERROR: LoadError: R_HOME is not a directory.
Stacktrace:
 [1] error(s::String)
   @ Base ./error.jl:33
 [2] top-level scope
   @ ~/data/.julia/packages/RCall/Wyd74/deps/build.jl:53
 [3] include(fname::String)
   @ Base.MainInclude ./client.jl:451
 [4] top-level scope
   @ none:5
in expression starting at /home/jrun/data/.julia/packages/RCall/Wyd74/deps/build.jl:11
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia-1.7.3/share/julia/stdlib/v1.7/Pkg/src/Types.jl:68
  [2] (::Pkg.Operations.var"#62#67"{Bool, Pkg.Types.Context, String, Pkg.Types.PackageSpec})()
    @ Pkg.Operations /opt/julia-1.7.3/share/julia/stdlib/v1.7/Pkg/src/Operations.jl:962
  [3] withenv(::Pkg.Operations.var"#62#67"{Bool, Pkg.Types.Context, String, Pkg.Types.PackageSpec}, ::Pair{String, String}, ::Vararg{Pair{String}})
    @ Base ./env.jl:172
  [4] (::Pkg.Operations.var"#99#103"{String, Bool, Bool, Bool, Pkg.Operations.var"#62#67"{Bool, Pkg.Types.Context, String, Pkg.Types.PackageSpec}, Pkg.Types.PackageSpec})()
    @ Pkg.Operations /opt/julia-1.7.3/share/julia/stdlib/v1.7/Pkg/src/Operations.jl:1506
  [5] with_temp_env(fn::Pkg.Operations.var"#99#103"{String, Bool, Bool, Bool, Pkg.Operations.var"#62#67"{Bool, Pkg.Types.Context, String, Pkg.Types.PackageSpec}, Pkg.Types.PackageSpec}, temp_env::String)
    @ Pkg.Operations /opt/julia-1.7.3/share/julia/stdlib/v1.7/Pkg/src/Operations.jl:1390
  [6] (::Pkg.Operations.var"#98#102"{Bool, Bool, Bool, Pkg.Operations.var"#62#67"{Bool, Pkg.Types.Context, String, Pkg.Types.PackageSpec}, Pkg.Types.Context, Pkg.Types.PackageSpec, String, Pkg.Types.Project, String})(tmp::String)
    @ Pkg.Operations /opt/julia-1.7.3/share/julia/stdlib/v1.7/Pkg/src/Operations.jl:1469
  [7] mktempdir(fn::Pkg.Operations.var"#98#102"{Bool, Bool, Bool, Pkg.Operations.var"#62#67"{Bool, Pkg.Types.Context, String, Pkg.Types.PackageSpec}, Pkg.Types.Context, Pkg.Types.PackageSpec, String, Pkg.Types.Project, String}, parent::String; prefix::String)
    @ Base.Filesystem ./file.jl:750
  [8] mktempdir(fn::Function, parent::String) (repeats 2 times)
    @ Base.Filesystem ./file.jl:748
  [9] sandbox(fn::Function, ctx::Pkg.Types.Context, target::Pkg.Types.PackageSpec, target_path::String, sandbox_path::String, sandbox_project_override::Pkg.Types.Project; force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia-1.7.3/share/julia/stdlib/v1.7/Pkg/src/Operations.jl:1435
 [10] sandbox(fn::Function, ctx::Pkg.Types.Context, target::Pkg.Types.PackageSpec, target_path::String, sandbox_path::String, sandbox_project_override::Pkg.Types.Project)
    @ Pkg.Operations /opt/julia-1.7.3/share/julia/stdlib/v1.7/Pkg/src/Operations.jl:1432
 [11] build_versions(ctx::Pkg.Types.Context, uuids::Set{Base.UUID}; verbose::Bool)
    @ Pkg.Operations /opt/julia-1.7.3/share/julia/stdlib/v1.7/Pkg/src/Operations.jl:943
 [12] build(ctx::Pkg.Types.Context, uuids::Set{Base.UUID}, verbose::Bool)
    @ Pkg.Operations /opt/julia-1.7.3/share/julia/stdlib/v1.7/Pkg/src/Operations.jl:822
 [13] build(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; verbose::Bool, kwargs::Base.Pairs{Symbol, Base.TTY, Tuple{Symbol}, NamedTuple{(:io,), Tuple{Base.TTY}}})
    @ Pkg.API /opt/julia-1.7.3/share/julia/stdlib/v1.7/Pkg/src/API.jl:992
 [14] build(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.TTY, kwargs::Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
    @ Pkg.API /opt/julia-1.7.3/share/julia/stdlib/v1.7/Pkg/src/API.jl:149
 [15] build(pkgs::Vector{Pkg.Types.PackageSpec})
    @ Pkg.API /opt/julia-1.7.3/share/julia/stdlib/v1.7/Pkg/src/API.jl:144
 [16] #build#99
    @ /opt/julia-1.7.3/share/julia/stdlib/v1.7/Pkg/src/API.jl:142 [inlined]
 [17] build
    @ /opt/julia-1.7.3/share/julia/stdlib/v1.7/Pkg/src/API.jl:142 [inlined]
 [18] #build#98
    @ /opt/julia-1.7.3/share/julia/stdlib/v1.7/Pkg/src/API.jl:141 [inlined]
 [19] build(pkg::String)
    @ Pkg.API /opt/julia-1.7.3/share/julia/stdlib/v1.7/Pkg/src/API.jl:141
 [20] top-level scope
    @ REPL[119]:1

Thanks

2

@parssh.mehta at the moment, we will not be able to support RCall in a Pumas environment.

3

:frowning_face: Hopefully soon. Thanks @vjd .